Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program 200603 1st Raster Digital Data Silver Spring, MD NOAA's National Ocean Service (NOS), National Centers for Coastal Ocean Science (NCCOS) http://ccma.nos.noaa.gov/ecosystems/coralreef/usvi_nps.aspx This dataset contains an ESRI Grid representing the rugosity of an inshore portion of the NPS's Virgin Islands Coral Reef National Monument, south of St. John, US Virgin Islands, based on a 1m bathymetric grid. Rugosity is defined as the ratio of surface area to planar area and is used as a measure of benthic terrain complexity or "roughness". Rugosity values near 1 represent flat, smooth terrain, while higher values reflect increasing rugosity or terrain roughness. For rugosity grid interpretation, is is recommended that the grid be reclassified according to standard deviation divisions. NOAA's NOS/NCCOS/CCMA Biogeography Team, in collaboration with NOAA vessel Nancy Foster and territory, federal, and private sector partners, acquired multibeam bathymetry data in the US Virgin Islands from 2/1/05 to 2/12/05. Data was acquired with a pole-mounted Reson 8101 ER multibeam echosounder (240 kHz) and processed by a NOAA contractor using CARIS HIPS v5.4 software. Data has all correctors applied (attitude, sound velocity) and has been reduced to mean lower low water (MLLW) using final approved tides and zoning from NOAA COOPS. Data is in UTM zone 20 north, datum NAD83. The processed CARIS data was used to generate a CARIS BASE surface based on swath angle. An ASCII XYZ file was exported from the BASE surface and opened in ESRI ArcMap 9 as an XY event. Then the ArcToolbox conversion tool 'Feature to Raster' was used to generate an ESRI Grid of bathymetry. The Benthic Terrain Modeller (BTM) tool, a collection of ArcGIS terrain visualization tools developed by the Oregon State University (OSU) Department of Geosciences and the National Oceanic and Atmospheric Administration (NOAA) Coastal Services Center, was used to calculate the rugosity of that bathymetric grid. More information on the specific algorithms used can be found in the BTM's documentation. The project was conducted to meet IHO Order 1 and 2 accuracy standards, dependant on the project area and depth. All users should individually evaluate the suitability of this data according to their own needs and standards. This derived bathymetry product is based on multibeam data that was collected as IOCM (Integrated Ocean and Coastal Mapping) project NF-05-05 during the second year of an ongoing NOAA scientific research mission in the US Caribbean to characterize nearshore coral reef habitats at depths down to 300 meters. The mission purpose is to better understand the resources within the surveyed reef habitats, and ultimately develop species utilization models linking physical habitats with biological information. The multibeam backscatter, multibeam bathymetry, and ground truth video footage collected during the 2005 mission will be used internally to characterize sea floor topography and to create benthic habitat maps, helping NOAA meet its mapping commitment to the US Coral Reef Task Force. The resulting publicly-distributed data is also a contribution to the greater scientific community interested in the USVI seafloor. 20050201 20050212 ground condition Complete As needed -64.783693 -64.677904 18.312996 18.277376 CoRIS Theme Thesaurus EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Rugosity EARTH SCIENCE > Oceans > Bathymetry/Seafloor Topography > Bathymetry EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > GIS EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Habitats EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Rugosity None Grid Multibeam SWMB Raster Biogeography Nancy Foster Reson 8101 Seafloor MBES NF0505 Sonar NPS IOCM Integrated Ocean and Coastal Mapping ISO 19115 Topic Category elevation 006 CoRIS Discovery Thesaurus Geographic Information > Habitats CoRIS Place Thesaurus OCEAN BASIN > Atlantic Ocean > Caribbean Sea > Virgin Islands > Virgin Islands > St. John (18N064W0011) COUNTRY/TERRITORY > United States of America > U. S. Virgin Islands > St. John > St. John (18N064W0011) None USVI Virgin Islands Coral Reef National Monument VICRNM VIIS VICR CoRIS Region USVI Please cite any use of this data. Note: NOT TO BE USED FOR NAVIGATION. These data were prepared by an agency of the United States Government. Neither the United States Government nor any agency thereof, nor any of their employees, make any warranty, expressed or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed in this report, or represents that its use would not infringe privately owned rights. Reference therein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof. Any views and opinions of authors expressed herein do not necessarily state or reflect those of the United States Government or any agency thereof. Although all data have been used by NOAA, no warranty, expressed or implied, is made by NOAA as to the accuracy of the data and/or related materials. The act of distribution shall not constitute any such warranty, and no responsibility is assumed by NOAA in the use of these data or related materials. Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program Project Manager - US Virgin Islands mailing and physical address

1305 East West Highway, SSMC4

Silver Spring MD 20910 USA (301) 713-3028 (301) 713-4388 Contact info is for CCMA general reception. Please ask for current Biogeography project manager for USVI. Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program NOAA - NMAO personnel and R/V NANCY FOSTER Microsoft Windows XP Version 5.1 (Build 2600) Service Pack 2; ESRI ArcCatalog 9.0.0.535 While the project was conducted to meet IHO Order 1 and 2 accuracy standards, dependant on project area and depth, all users should independently analyze the dataset according to their own needs and standards to determine data usability. This ESRI Grid is sourced from a gridded dataset. The original full-resolution multibeam data was used to create a downsampled uniform-resolution CARIS BASE (Bathymetry Associated with Statistical Error) surface grid with a best depth component. The downsampled grid nodes from that depth surface were then exported and used to generate the ESRI Grid. Some positional shifts may have occurred between the original data points and the transformed grid. See Data Acquisition and Processing Report (DAPR) for NF-05-05. See Data Acquisition and Processing Report (DAPR) for NF-05-05. Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program Unpublished Material vector digital data external hard drive 200502 200502 ground condition NF-05-05 GSF Raw Multibeam Data Original raw full resolution dataset. Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program Unpublished Material vector digital data external hard drive 200502 200502 ground condition NF-05-05 HDCS Processed Multibeam Data Processed, cleaned, and corrected full resolution dataset. Sourced from raw GSF data. Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program Unpublished Material raster digital data external hard drive 200502 200502 ground condition NF-05-05 BASE Surface Downsampled CARIS BASE (Bathymetry Associated with Statistical Error) grid with best depth layer. Sourced from processed HDCS data. Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program 200603 tabular digital data http://ccma.nos.noaa.gov/ecosystems/coralreef/usvi_nps.aspx external hard drive 200502 200502 ground condition NF-05-05 ASCII XYZ Multibeam Data Downsampled ASCII text file containing XYZ values. XYZ equals northing, easting, and depth in meters. Sourced from CARIS BASE surface. Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program 200603 raster digital data http://ccma.nos.noaa.gov/ecosystems/coralreef/usvi_nps.aspx external hard drive 200502 200502 ground condition NF-05-05 ESRI Grid Multibeam Bathymetry Gridded bathymetry. For this project, the Chief Scientist was NOAA/NOS/NCCOS/CCMA's Tim Battista and the Lead Hydrographer was independent contractor Jay Lazar. Data was collected aboard the NOAA ship Nancy Foster from 2/1/05 to 2/12/05, as project number NF-05-05-VI. Multibeam data was acquired in GSF format with a pole-mounted Reson 8101 ER multibeam echosounder (240 kHz), with options 033, 037, and 040. Reson backscatter snippet collection was enabled. SAIC ISS 2000 software was used to interface with the Reson system. Line spacing for acquisition was three times the water depth, and data was retained out to 60 or 70 degrees from nadir, depending on project area. Heave, roll, pitch and heading correctors were collected using an Applanix POS/MV Model 320 inertial measurement unit (IMU) and associated Trimble GPS antennas. Sound velocity profiles were acquired with a Seabird Electronics SeaCat SBE19P CTD profiler and processed using Seabird Seaterm software, then applied directly to the raw GSF data. Positioning was obtained using Northstar 941X GPS receivers with differential correctors from U.S. Coast Guard CORS beacon Isabel, Puerto Rico. Data was reduced to Mean Lower-Low Water (MLLW) using final approved tides from NOAA COOPS, based on National Water Level Observation Network (NWLON) primary tide stations at Charlotte Amalie, VI (9751639) and Lime Tree Bay, VI (9751401). NF-05-05 GSF Multibeam Data 200502 Raw SWMB data in GSF (generic sensor format) format were converted and processed using CARIS HIPS v5.4 software, resulting in a CARIS HDCS format dataset with all correctors applied. Attitude and SWMB data was cleaned of fliers, and SWMB data was reviewed in subset mode by a NOAA contractor. Process Date Range: 200502 - 200511 NF-05-05 HDCS Multibeam Data 200511 After being submitted to CCMA by the contractor, CARIS HIPS v5.4 was used to generate a CARIS BASE surface (similar to a DTM), based on weighted swath angle, from the processed HDCS data. Then CARIS export tool "BASE Surface to ASCII" was used to export a comma delimited ASCII XYZ file, with Easting, Northing, and Depth values, using ground position units (NAD83 UTM zone 20N). NF-05-05 BASE Surface 200512 The ASCII XYZ file was opened in ArcMap 9 and the 'Display XY Data' option was used to add the XY data as an event with spatial reference NAD83 UTM zone 20N. Finally, the ArcToolbox 9 conversion tool "Feature to Raster" was then used to convert the XY event into an ESRI Grid, based on the depth field Z. These steps were accomplished using an inhouse Arc script which combined these functions and allowed bulk processing. NF-05-05 ASCII XYZ Multibeam Data 200512 An ESRI grid of source bathymetry was input into the Rugosity Builder Tool, a component of the ArcGIS Benthic Terrain Modeller (BTM). The BTM tool, a collection of ArcGIS terrain visualization tools developed by the Oregon State University (OSU) Department of Geosciences and the National Oceanic and Atmospheric Administration (NOAA) Coastal Services Center, calculated the rugosity of that bathymetric grid based on an algorithm developed by Jeff Jenness. A short summary of the process, quoted directy from the BTM's documentation, is as follows: "...rugosity derivation relies, in part, on a neighborhood analysis using a 3 grid cell by 3 grid cell neighborhood. An algorithm is passed through the Raster Map Algebra Operation object within Spatial Analyst that calculates the planar distance between the center point of the center cell and of each of the eight surrounding cells in the neighborhood. Next, using the Pythagorean Theorem, the surface distance is calculated for each planar distance using the difference in elevation between the cells. The result of this function is sixteen separate grid data sets with each cell value equal to this surface distance. The next step in the process is to calculate the area formed by three adjacent sides. The result is eight triangular surface area grids. These grid datasets are combined to obtain a surface area data set for the input bathymetric data set. The final step in the process is to create a data set that represents the ratio of surface area to planar area. This final data set represents rugosity for the study area." More information on the specific algorithms used, and contact points for questions, can be found in the BTM's documentation. Rugosity values near 1 represent flat smooth terrain, while higher values reflect increasing rugosity or terrain roughness. For rugosity grid interpretation, is is recommended that the grid be reclassified according to standard deviation divisions. NF-05-05 ESRI Grid Multibeam Bathymetry 200607 Metadata imported. D:\Metadata\2005 Templates\2005_MBRugosity_Grid_MetadataTemplate.xml 200607 Raster Grid Cell 3837 11149 1 Universal Transverse Mercator 20 0.999600 -63.000000 0.000000 500000.000000 0.000000 Row and Column 1.000000 1.000000 meters North American Datum of 1983 Geodetic Reference System 80 6378137.000000 298.257222 Department of Commerce (DOC), National Oceanic and Atmospheric Administration (NOAA), National Ocean Service (NOS), Center for Coastal Monitoring and Assessment (CCMA), Biogeography Program Project Manager - US Virgin Islands mailing and physical address

1305 East West Highway, SSMC4

Silver Spring MD 20910 USA (301) 713-3028 (301) 713-4388 Contact info is for CCMA general reception. Please ask for current Biogeography project manager for USVI. Downloadable Data These data were prepared by an agency of the United States Government. Neither the United States Government nor any agency thereof, nor any of their employees, make any warranty, expressed or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed in this report, or represents that its use would not infringe privately owned rights. Reference therein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not necessarily constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency thereof. Any views and opinions of authors expressed herein do not necessarily state or reflect those of the United States Government or any agency thereof. Although all data have been used by NOAA, no warranty, expressed or implied, is made by NOAA as to the accuracy of the data and/or related materials. The act of distribution shall not constitute any such warranty, and no responsibility is assumed by NOAA in the use of these data or related materials. ESRI Grid 165.534 http://ccma.nos.noaa.gov/products/biogeography/usvi_nps/data/ None 20121220 NOAA/NOS/NCCOS/CCMA Biogeography Project Manager mailing and physical address

1305 East West Highway, SSMC4

Silver Spring MD 20910 USA (301) 713-3028 FGDC Content Standard for Digital Geospatial Metadata FGDC-STD-001-1998 20070425041041 None 20050201 20050212 http://www.coris.noaa.gov/metadata/records/html/nccos_bathymetry_1m_grid_rugosity_vi_coral_reef_nat_mnt_st_john_2005.html 1700